| 1 | Comparative evaluation of bioinformatic tools for virus-host prediction and their application to a highly diverse community in the Cuatro Ciénegas Basin, Mexico | Coautor: Alcaraz L.D., Cisneros-Martínez A.M., Rodriguez-Cruz U.E., Becerra A., et al. | 2024 | PLOS ONE | WoS-id: 001158449800024
Scopus-id: 2-s2.0-85183807776
| 0 | 0 |
| 2 | Revealing the microbiome diversity and biocontrol potential of field Aedes ssp.: Implications for disease vector management | 2ᵒ autor: Alcaraz L.D., Hernández A.M., Hernández-Álvarez C., Romero M.F., et al. | 2024 | PLOS ONE | WoS-id: 001214099700037
Scopus-id: 2-s2.0-85191854558
| 2 | 2 |
| 3 | Unravelling the genomic and environmental diversity of the ubiquitous Solirubrobacter | Coautor: Alcaraz, LD, Jara-Servin, A, Mejia, G, Romero, MF, et al. | 2024 | ENVIRONMENTAL MICROBIOLOGY | WoS-id: 001291959600001
Scopus-id: 2-s2.0-85201370715
| 0 | 0 |
| 4 | Where environmental microbiome meets its host: Subway and passenger microbiome relationships | 2ᵒ autor y autor de correspondencia: Alcaraz L.D., Peimbert M. | 2023 | MOLECULAR ECOLOGY | WoS-id: 000777615700001
Scopus-id: 2-s2.0-85127404083
| 9 | 10 |
| 5 | The quorum quenching enzyme Aii20J modifies in vitro periodontal biofilm formation | Coautor: Alcaraz, Luis D., Parga, Ana, Muras, Andrea, Otero-Casal, Paz, et al. | 2023 | FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY | WoS-id: 000930995300001
Scopus-id: 2-s2.0-85148217030
| 15 | 15 |
| 6 | Root microbiome diversity and structure of the Sonoran desert buffelgrass (Pennisetum ciliare L.) | Coautor: Alcaraz L.D., Jara-Servin A., Silva A., Barajas H., et al. | 2023 | PLOS ONE | WoS-id: 001050599900010
Scopus-id: 2-s2.0-85159687620
| 4 | 5 |
| 7 | Exoprotease exploitation and social cheating in a Pseudomonas aeruginosa environmental lysogenic strain with a noncanonical quorum sensing system | Coautor: Alcaraz L.D., Huelgas-Méndez D., Cazares D., Ceapã C.D., et al. | 2023 | FEMS MICROBIOLOGY ECOLOGY | WoS-id: 001053115600004
Scopus-id: 2-s2.0-85168791500
| 1 | 0 |
| 8 | A study of microbial diversity in a biofertilizer consortium | Coautor: Alcaraz L.D., Hernández-Álvarez C., Peimbert M., Rodríguez-Martin P., et al. | 2023 | PLOS ONE | Scopus-id: 2-s2.0-85168714143
| 0 | 3 |
| 9 | Squash root microbiome transplants and metagenomic inspection for in situ arid adaptations | Coautor: Alcaraz, Luis D., Hernandez-Alvarez, Cristobal, Garcia-Oliva, Felipe, Cruz-Ortega, Rocio, et al. | 2022 | SCIENCE OF THE TOTAL ENVIRONMENT | WoS-id: 000704385400010
Scopus-id: 2-s2.0-85115077250
| 13 | 15 |
| 10 | Yeasts Inhabiting Extreme Environments and Their Biotechnological Applications | Coautor: Alcaraz, Luis D., Segal-Kischinevzky, Claudia, Romero-Aguilar, Lucero, Lopez-Ortiz, Geovani, et al. | 2022 | Microorganisms | WoS-id: 000785247800001
Scopus-id: 2-s2.0-85128771968
| 37 | 48 |
| 11 | Metagenomics of mine tailing rhizospheric communities and its selection for plant establishment towards bioremediation | Coautor: Alcaraz, Luis D., Romero, Miguel F., Gallego, Diana, Lechuga-Jimenez, Arely, et al. | 2021 | MICROBIOLOGICAL RESEARCH | WoS-id: 000636788500003
Scopus-id: 2-s2.0-85102618141
| 12 | 15 |
| 12 | Holocene life and microbiome profiling in ancient tropical Lake Chalco, Mexico | Coautor: Alcaraz, Luis D., Moguel, Barbara, Perez, Liseth, Blaz, Jazmin, et al. | 2021 | SCIENTIFIC REPORTS | WoS-id: 000672616000018
Scopus-id: 2-s2.0-85110981947
| 8 | 8 |
| 13 | Genomic adaptations in information processing underpin trophic strategy in a whole-ecosystem nutrient enrichment experiment | Coautor: Alcaraz, Luis D., Okie, Jordan G., Poret-Peterson, Amisha T., Lee Z.M.P., et al. | 2020 | eLife | WoS-id: 000516555700001
Scopus-id: 2-s2.0-85079596406
| 24 | 24 |
| 14 | Mucosal Microbiome Profiles Polygenic Irritable Bowel Syndrome in Mestizo Individuals | Coautor: David Alcaraz, Luis, Arredondo-Hernandez, Rene, Schmulson, Max, Orduna, Patricia, et al. | 2020 | FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY | WoS-id: 000525509100001
Scopus-id: 2-s2.0-85083054301
| 4 | 4 |
| 15 | Changes in the vaginal microbiota across a gradient of urbanization | Coautor: ALCARAZ, LUIS DAVID, Vargas-Robles, Daniela, Morales, Natalia, Rodriguez, Iveth, et al. | 2020 | SCIENTIFIC REPORTS | WoS-id: 000556872700020
Scopus-id: 2-s2.0-85088585571
| 18 | 25 |
| 16 | Station and train surface microbiomes of Mexico City?s metro (subway/underground) | Coautor: Alcaraz L.D., Hernández A.M., Vargas-Robles, Daniela, Peimbert, Mariana | 2020 | SCIENTIFIC REPORTS | WoS-id: 000560076900048
Scopus-id: 2-s2.0-85085705868
| 23 | 25 |
| 17 | Passenger-surface microbiome interactions in the subway of Mexico City | Coautor: Alcaraz L.D., Vargas-Robles D., Gonzalez-Cedillo C., Hernandez A.M., et al. | 2020 | PLOS ONE | WoS-id: 000563929200014
Scopus-id: 2-s2.0-85089714294
| 15 | 16 |
| 18 | Testing the Two-Step Model of Plant Root Microbiome Acquisition Under Multiple Plant Species and Soil Sources | Coautor: Alcaraz, Luis D., Barajas, Hugo R., Martinez-Sanchez, Shamayim, Romero, Miguel F., et al. | 2020 | FRONTIERS IN MICROBIOLOGY | WoS-id: 000581061700001
Scopus-id: 2-s2.0-85094106380
| 18 | 19 |
| 19 | Deep microbial community profiling along the fermentation process of pulque, a biocultural resource of Mexico | Coautor: Alcaraz L.D., Rocha-Arriaga C., Espinal-Centeno A., Martinez-Sánchez S., et al. | 2020 | MICROBIOLOGICAL RESEARCH | WoS-id: 000587292400001
Scopus-id: 2-s2.0-85092372774
| 25 | 29 |
| 20 | Global genomic similarity and core genome sequence diversity of the Streptococcus genus as a toolkit to identify closely related bacterial species in complex environments | Coautor: Alcaraz, Luis D., Barajas, Hugo R., Romero, Miguel F., Martinez-Sanchez, Shamayim | 2019 | PEERJ | WoS-id: 000455765300004
Scopus-id: 2-s2.0-85060084396
| 10 | 11 |
| 21 | The gut microbiome of Mexican children affected by obesity | Coautor: Alcaraz L.D., Maya-Lucas O., Murugesan S., Nirmalkar K., et al. | 2019 | Anaerobe | WoS-id: 000460823600003
Scopus-id: 2-s2.0-85057167865
| 77 | 83 |
| 22 | Microbiome-MX 2018: microbiota and microbiome opportunities in Mexico, a megadiverse country | Coautor: Alcaraz L.D., Cornejo-Granados F., Calderón de la Barca A.M., Torres N., et al. | 2019 | RESEARCH IN MICROBIOLOGY | WoS-id: 000476472100008
Scopus-id: 2-s2.0-85064323768
| 1 | 2 |
| 23 | Evolution of bacteria seen through their essential genes: the case of Pseudomonas aeruginosa and Azotobacter vinelandii | Coautor: Alcaraz L.D., Martinez-Carranza, Enrique, Ponce-Soto G.-Y., Servin-Gonzalez, Luis, et al. | 2019 | MICROBIOLOGY-SGM | WoS-id: 000484361700006
Scopus-id: 2-s2.0-85071784707
| 4 | 6 |
| 24 | Variability of bacterial essential genes among closely related bacteria: The case of Escherichia coli | Coautor: Alcaraz, Luis-David, Martinez-Carranza, Enrique, Barajas, Hugo, Servin-Gonzalez, Luis, et al. | 2018 | FRONTIERS IN MICROBIOLOGY | WoS-id: 000433322000001
Scopus-id: 2-s2.0-85047664939
| 25 | 26 |
| 25 | High rate of infection by only oncogenic human papillomavirus in Amerindians | Coautor: David Alcaraz, Luis, Vargas-Robles, Daniela, Magris, Magda, Morales, Natalia, et al. | 2018 | mSphere | WoS-id: 000437234900017
Scopus-id: 2-s2.0-85048232007
| 12 | 14 |
| 26 | Life in Hot Spring Microbial Mats Located in the Trans-Mexican Volcanic Belt: A 16S/18S rRNA Gene and Metagenomic Analysis | 2ᵒ autor: Alcaraz, Luis D., Prieto-Barajas, Cristina M., Valencia-Cantero, Eduardo, Santoyo, Gustavo | 2018 | GEOMICROBIOLOGY JOURNAL | WoS-id: 000437337500006
Scopus-id: 2-s2.0-85045145000
| 12 | 12 |
| 27 | Marchantia liverworts as a proxy to plants? basal microbiomes | 1ᵉʳ autor: Alcaraz, Luis D., Peimbert, Mariana, Barajas, Hugo R., Dorantes-Acosta, Ana E., et al. | 2018 | SCIENTIFIC REPORTS | WoS-id: 000442530600018
Scopus-id: 2-s2.0-85052222919
| 44 | 46 |
| 28 | Variability of Bacterial Essential Genes Among Closely Related Bacteria: The Case of Escherichia coli (vol 9, 1059, 2018) | Coautor: Alcaraz, Luis-David, Martinez-Carranza, Enrique, Barajas, Hugo, Servin-Gonzalez, Luis, et al. | 2018 | FRONTIERS IN MICROBIOLOGY | WoS-id: 000445904600001
Scopus-id: 2-s2.0-85117699096
| 1 | 2 |
| 29 | The lost world of Cuatro Cienegas Basin, a relictual bacterial niche in a desert oasis | Coautor: Alcaraz L.D., Souza V., Moreno-Letelier A., Travisano M., et al. | 2018 | eLife | WoS-id: 000450548800001
Scopus-id: 2-s2.0-85056693889
| 30 | 30 |
| 30 | Complete Genome Sequences of Two Bacillus pumilus Strains from Cuatrocienegas, Coahuila, Mexico | 2ᵒ autor: Alcaraz, Luis D., Zarza, Eugenia, Aguilar-Salinas, Bernardo, Islas, Africa, et al. | 2018 | Microbiology Resource Announcements | WoS-id: 000452362800035
Scopus-id: 2-s2.0-85046662013
| 2 | 1 |
| 31 | Complete Genome Sequences of Two Bacillus pumilus Strains from Cuatrocienegas, Coahuila, Mexico (vol 6, e00364, 2018) | 2ᵒ autor: Alcaraz, Luis D., Zarza, Eugenia, Aguilar-Salinas, Bernardo, Islas, Africa, et al. | 2018 | Microbiology Resource Announcements | WoS-id: 000452401100014
Scopus-id: 2-s2.0-85056357753
| 0 | 0 |
| 32 | Single Genus Approach to Understanding Bacterial Diversity, Niche, Distribution, and Genomics: The Bacillus in Cuatro Cienegas | 2ᵒ autor: David Alcaraz, Luis, Rodriguez Torres, Maria Dolores, Souza, Valeria, Olmedo-Alvarez, Gabriela | 2018 | Cuatro Cienegas Basin-An Endangered Hyperdiverse Oasis | WoS-id: 000487253500009
| 1 | 0 |
| 33 | Plants from the abandoned Nacozari mine tailings: evaluation of their phytostabilization potential | Coautor: David Alcaraz, Luis, Santos, Alina E., Cruz-Ortega, Rocio, Meza-Figueroa, Diana, et al. | 2017 | PEERJ | WoS-id: 000400707100005
Scopus-id: 2-s2.0-85018261539
| 20 | 22 |
| 34 | The Transcriptional Regulators of the CRP Family Regulate Different Essential Bacterial Functions and Can Be Inherited Vertically and Horizontally | 2ᵒ autor: Alcaraz, Luis D., Soberon-Chavez, Gloria, Morales, Estefania, Ponce-Soto, Gabriel Y., et al. | 2017 | FRONTIERS IN MICROBIOLOGY | WoS-id: 000402432800001
Scopus-id: 2-s2.0-85021375218
| 25 | 27 |
| 35 | Transcriptional profiling of sugarcane leaves and roots under progressive osmotic stress reveals a regulated coordination of gene expression in a spatiotemporal manner | Coautor: Alcaraz, Luis D., Pereira-Santana, Alejandro, Alvarado-Robledo, Edyciel J., Zamora-Briseno, Jesus A., et al. | 2017 | PLOS ONE | WoS-id: 000417648600041
Scopus-id: 2-s2.0-85038843703
| 19 | 27 |
| 36 | Seasonal changes in a maize-based polyculture of central Mexico reshape the co-occurrence networks of soil bacterial communities | Coautor: Alcaraz, Luis D., Rebollar, Eria A., Sandoval-Castellanos, Edson, Roessler, Kyria, et al. | 2017 | FRONTIERS IN MICROBIOLOGY | WoS-id: 000418120700001
Scopus-id: 2-s2.0-85038225474
| 28 | 29 |
| 37 | Complete genome sequence of Bacillus horikoshii strain 20a from Cuatro Cienegas, Coahuila, Mexico | 2ᵒ autor: Alcaraz L.D., Zarza E., Aguilar-Salinas B., Islas A., et al. | 2017 | Genome Announcements | WoS-id: 000460706000004
Scopus-id: 2-s2.0-85026471740
| 3 | 5 |
| 38 | Complete genome sequences of two Pseudomonas aeruginosa strains isolated from children with bacteremia | Coautor: Alcaraz, Luis D., Espinosa-Camacho, Luis F., Delgado, Gabriela, Miranda-Novales, Guadalupe, et al. | 2017 | Microbiology Resource Announcements | WoS-id: 000460731600029
Scopus-id: 2-s2.0-85028940778
| 3 | 5 |
| 39 | Complete genome sequences of four extensively drug-resistant Pseudomonas aeruginosa strains, isolated from adults with ventilator-associated pneumonia at a tertiary referral hospital in Mexico city | Coautor: Alcaraz, Luis D., Espinosa-Camacho, Luis F., Delgado, Gabriela, Soberon-Chavez, Gloria, et al. | 2017 | Microbiology Resource Announcements | WoS-id: 000460732900014
Scopus-id: 2-s2.0-85029225352
| 1 | 6 |
| 40 | The Metagenome of Utricularia gibba's Traps: Into the Microbial Input to a Carnivorous Plant | 1ᵉʳ autor: David Alcaraz, Luis, Martinez-Sanchez, Shamayim, Torres, Ignacio, Ibarra-Laclette, Enrique, et al. | 2016 | PLOS ONE | WoS-id: 000370038400113
Scopus-id: 2-s2.0-84959420534
| 14 | 14 |
| 41 | A novel Dreb2-type gene from Carica papaya confers tolerance under abiotic stress | Coautor: David Alcaraz, Luis, Arroyo-Herrera, Ana, Figueroa-Yanez, Luis, Castano, Enrique, et al. | 2016 | PLANT CELL TISSUE AND ORGAN CULTURE | WoS-id: 000372308500011
Scopus-id: 2-s2.0-84960390545
| 17 | 27 |
| 42 | Exploring the cockatiel (Nymphicus hollandicus) fecal microbiome, bacterial inhabitants of a worldwide pet | 1ᵉʳ autor: David Alcaraz, Luis, Hernandez, Apodinar M., Peimbert, Mariana | 2016 | PEERJ | WoS-id: 000391093600016
Scopus-id: 2-s2.0-85007364790
| 16 | 15 |
| 43 | High variability in quorum quenching and growth inhibition by furanone C-30 in Pseudomonas aeruginosa clinical isolates from cystic fibrosis patients | Coautor: Alcaraz L.D., García-Contreras R., Peréz-Eretza B., Jasso-Chávez R., et al. | 2015 | PATHOGENS AND DISEASE | WoS-id: 000362574300009
Scopus-id: 2-s2.0-84973413725
| 49 | 50 |
| 44 | Comparative genomics of NAC transcriptional factors in angiosperms: Implications for the adaptation and diversification of flowering plants | 2ᵒ autor: Alcaraz L.D., Pereira-Santana A., Castano, E, Sanchez-Calderon L., et al. | 2015 | PLOS ONE | WoS-id: 000365070700012
Scopus-id: 2-s2.0-84956939684
| 38 | 41 |
| 45 | Pseudomonas aeruginosa clinical and environmental isolates constitute a single population with high phenotypic diversity | Coautor: Alcaraz, LD, Grosso-Becerra, MV, Santos-Medellin, C, Gonzalez-Valdez, A, et al. | 2014 | Bmc Genomics | WoS-id: 000335601500001
Scopus-id: 2-s2.0-84900028288
| 83 | 88 |
| 46 | Antagonism influences assembly of a Bacillus guild in a local community and is depicted as a food-chain network | Coautor: Alcaraz L.D., Perez-Gutierrez, RA, López-Ramírez V., Islas Á., et al. | 2013 | ISME JOURNAL | WoS-id: 000316726400006
Scopus-id: 2-s2.0-84876462101
| 80 | 72 |
| 47 | A tissue-dependent hypothesis of dental caries | Coautor: Alcaraz L.D., Simón-Soro A., Belda-Ferre P., Cabrera-Rubio R., et al. | 2013 | CARIES RESEARCH | WoS-id: 000327054900008
Scopus-id: 2-s2.0-84888385221
| 102 | 107 |
| 48 | The oral metagenome in health and disease | 2ᵒ autor: Alcaraz L.D., Belda-Ferre P., Cabrera-Rubio R., Romero H., et al. | 2012 | ISME JOURNAL | WoS-id: 000299052500005
Scopus-id: 2-s2.0-84355161776
| 358 | 403 |
| 49 | Identifying a healthy oral microbiome through metagenomics | 1ᵉʳ autor: Alcaraz L.D., Belda-Ferre P., Cabrera-Rubio R., Romero H., et al. | 2012 | CLINICAL MICROBIOLOGY AND INFECTION | WoS-id: 000304759600015
Scopus-id: 2-s2.0-84861694251
| 59 | 70 |
| 50 | Phylogenetic Distribution and Evolutionary History of Bacterial DEAD-Box Proteins | 2ᵒ autor: Alcaraz L.D., López-Ramírez V., Moreno-Hagelsieb G., Olmedo-Álvarez G. | 2011 | JOURNAL OF MOLECULAR EVOLUTION | WoS-id: 000290578400006
Scopus-id: 2-s2.0-79958199058
| 28 | 27 |
| 51 | Genome sequence of Lactococcus garvieae UNIUD074, isolated in Italy from a lactococcosis outbreak | Coautor: Alcaraz L.D., Reimundo P., Pignatelli M., D'Auria G., et al. | 2011 | JOURNAL OF BACTERIOLOGY | WoS-id: 000292134900038
Scopus-id: 2-s2.0-79960398981
| 25 | 29 |
| 52 | Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma | Coautor: Alcaraz L.D., Kubicek C.P., Herrera-Estrella A., Seidl-Seiboth V., et al. | 2011 | GENOME BIOLOGY | WoS-id: 000292871100008
Scopus-id: 2-s2.0-79955115574
| 474 | 520 |
| 53 | First Draft Genome Sequence of a Strain from the Genus Citricoccus | Coautor: Alcaraz, LD, Hayano-Kanashiro C., López-Arredondo D.L., Cruz-Morales P., et al. | 2011 | JOURNAL OF BACTERIOLOGY | WoS-id: 000296153400024
Scopus-id: 2-s2.0-80055034653
| 3 | 6 |
| 54 | The ATL gene family from Arabidopsis thaliana and Oryza sativa comprises a large number of putative ubiquitin ligases of the RING-H2 type | Coautor: Alcaraz L.D., Serrano M., Parra S., Guzmán P. | 2006 | JOURNAL OF MOLECULAR EVOLUTION | WoS-id: 000236621100004
Scopus-id: 2-s2.0-33645522090
| 105 | 106 |
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