| 1 | Acinetobacter-the bad, the ugly, but also the good! | 1ᵉʳ autor: Castillo-Ramírez, S, López-Sánchez, R, Peralta, H | 2026 | mSphere | WoS-id: 001682279200001
Scopus-id: 2-s2.0-105034754815
| 0 | 0 |
| 2 | Acinetobacter baumannii?s ecology? more than meets the eye | 1ᵉʳ autor y autor de correspondencia: Castillo-Ramirez S. | 2026 | NATURE COMMUNICATIONS | WoS-id: 001794605700002
Scopus-id: 2-s2.0-105041965414
| 0 | 0 |
| 3 | Global multi-host genomic epidemiology of Acinetobacter baumannii reveals transmission at one health interfaces | Coautor: Castillo-Ramírez S., Aguilar-Vera A., López-Sánchez R., Hernández-Alvarez A.J., et al. | 2026 | NATURE COMMUNICATIONS | Scopus-id: 2-s2.0-105043696642
| 0 | 0 |
| 4 | New isolates from the 1970s to early 2000s provide insights into the evolution of Acinetobacter baumannii international clone 2 and its resistome | Coautor: Castillo-Ramírez S., Neil M., Grenier F., Allard N., et al. | 2026 | Microbial Genomics | Scopus-id: 2-s2.0-105043967631
| 0 | 0 |
| 5 | Geographic variation in abundance and diversity of Acinetobacter baumannii Vieuvirus bacteriophages | Coautor: Castillo-Ramírez, S, Arellano-Maciel, D, Hurtado-Ramírez, JM, Camelo-Valera, LC, et al. | 2025 | FRONTIERS IN MICROBIOLOGY | WoS-id: 001417604800001
Scopus-id: 2-s2.0-85217710015
| 3 | 3 |
| 6 | A core genome MLST scheme for Borrelia burgdorferi sensu lato improves insights into the evolutionary history of the species complex | Coautor: Castillo-Ramirez S., Hepner S., Jolley K.A., Mourkas E., et al. | 2025 | Cell Reports Methods | WoS-id: 001421651500001
Scopus-id: 2-s2.0-85214322219
| 11 | 11 |
| 7 | Metagenome-assembled genomes reveal novel diversity and atypical sources of a superbug | Coautor y autor de correspondencia: Castillo-Ramírez S., López-Sánchez R., Aguilar-Vera A. | 2025 | Microbiology Spectrum | WoS-id: 001447108000001
Scopus-id: 2-s2.0-105004754391
| 7 | 7 |
| 8 | Genomic epidemiology reveals antibiotic resistance transfer and polyclonal dissemination of Acinetobacter baumannii in a Paraguayan hospital | Coautor: Castillo-Ramirez, S, Bello-López, E, Kawabata, A, Cantero, J, et al. | 2025 | ANTIMICROBIAL AGENTS AND CHEMOTHERAPY | WoS-id: 001524014000001
Scopus-id: 2-s2.0-105013157363
| 5 | 4 |
| 9 | Acinetobacter baumannii: much more than a human pathogen | 1ᵉʳ autor: Castillo-Ramírez S., Aguilar-Vera A., Kumar A., Evans B. | 2025 | ANTIMICROBIAL AGENTS AND CHEMOTHERAPY | WoS-id: 001541895100001
Scopus-id: 2-s2.0-105014937008
| 20 | 23 |
| 10 | Global emergence of Acinetobacter baumannii International Clone 12 predominantly found in the Middle East | Coautor: Castillo-Ramírez S., Karah N., Faille N., Allard N., et al. | 2025 | Microbial Genomics | WoS-id: 001676565000006
Scopus-id: 2-s2.0-105023334525
| 4 | 5 |
| 11 | Phylogenomic and phenotypic analyses highlight the diversity of antibiotic resistance and virulence in both human and non-human Acinetobacter baumannii | Coautor: Castillo-Ramírez S., Sykes E.M.E., Mateo-Estrada V., Engelberg R., et al. | 2024 | mSphere | WoS-id: 001180017300002
Scopus-id: 2-s2.0-85188811804
| 15 | 15 |
| 12 | Unsupervised learning and natural language processing highlight research trends in a superbug | Coautor: Castillo-Ramírez S., Méndez-Cruz C.-F., Rodríguez-Herrera J., Varela-Vega A., et al. | 2024 | Frontiers In Artificial Intelligence | WoS-id: 001195969000001
Scopus-id: 2-s2.0-85189312620
| 1 | 3 |
| 13 | Acinetobacter junii: an emerging One Health pathogen | Coautor: Castillo-Ramírez S., Aguilar-Vera A., Bello-López E., Pantoja-Nuñez G.I., et al. | 2024 | mSphere | WoS-id: 001201679200001
Scopus-id: 2-s2.0-85194977916
| 25 | 27 |
| 14 | Assembly collapsing versus heterozygosity oversizing: detection of homokaryotic and heterokaryotic Laccaria trichodermophora strains by hybrid genome assembly | Coautor: Castillo-Ramírez S., Ángeles-Argáiz R.E., Aguirre-Beltrán L.F.L., Hernández-Oaxaca D., et al. | 2024 | Microbial Genomics | WoS-id: 001222187300009
Scopus-id: 2-s2.0-85189058384
| 6 | 6 |
| 15 | On the road to genomically defining bacterial intra-species units | 1ᵉʳ autor y autor de correspondencia: Castillo-Ramírez S. | 2024 | Msystems | WoS-id: 001258363100001
Scopus-id: 2-s2.0-85199689986
| 5 | 5 |
| 16 | Characterization of a colistin resistant, hypervirulent hospital isolate of Acinetobacter courvalinii from Canada | Coautor: Castillo-Ramírez S., Sykes E.M.E., Mateo-Estrada V., Muzaleva A., et al. | 2024 | EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES | WoS-id: 001280275600002
Scopus-id: 2-s2.0-85200001111
| 4 | 3 |
| 17 | Genomic and Phylogenomic Characterization of Carbapenem-resistant Pseudomonas aeruginosa ?High-risk? Clone O4/ExoS+/ST654 Circulating in Chilean Hospitals | Coautor: Castillo-Ramírez S., Opazo-Capurro A., Aguilar-Vera O.A., González-Muñoz P., et al. | 2024 | JOURNAL OF GLOBAL ANTIMICROBIAL RESISTANCE | WoS-id: 001284400900001
Scopus-id: 2-s2.0-85199718627
| 6 | 6 |
| 18 | Host population structure and species resolution reveal prophage transmission dynamics | Coautor: Castillo-Ramírez S., Tenorio-Carnalla K., Aguilar-Vera A., Hernández-Alvarez A.J., et al. | 2024 | Mbio | WoS-id: 001321191800002
Scopus-id: 2-s2.0-85206957703
| 9 | 9 |
| 19 | Description of genome sequences of arthropod-associated spirochetes of the genus Entomospira | Coautor: Castillo-Ramirez, S, Sikutova, S, Graña-Miraglia, L, Vancová, M, et al. | 2024 | Microbiology Resource Announcements | WoS-id: 001355865500001
Scopus-id: 2-s2.0-85216329273
| 0 | 0 |
| 20 | Geography, Antimicrobial Resistance, and Genomics of Salmonella enterica (Serotypes Newport and Anatum) from Meat in Mexico (2021?2023) | Coautor: Castillo-Ramírez S., Reynoso E.C., Delgado-Suárez E.J., Hernández-Pérez C.F., et al. | 2024 | Microorganisms | WoS-id: 001384663000001
Scopus-id: 2-s2.0-85213274101
| 4 | 4 |
| 21 | Editorial: Mobile genetic elements as dissemination drivers of multidrug-resistant Gram-negative bacteria | Coautor: Castillo-Ramirez, Santiago, Nodari, Carolina Silva, Opazo-Capurro, Andres, Mattioni Marchetti V. | 2023 | FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY | WoS-id: 000962109000001
Scopus-id: 2-s2.0-85151320699
| 4 | 5 |
| 22 | Acinetobacter baumannii from grass: novel but non- resistant clones | Coautor: Castillo-Ramirez, Santiago, Mateo-Estrada, Valeria, Tyrrell, Ciara, Evans, Benjamin A., et al. | 2023 | Microbial Genomics | WoS-id: 001037022200005
Scopus-id: 2-s2.0-85164846616
| 25 | 24 |
| 23 | Acinetobacter baumannii IC2 and IC5 Isolates with Co-Existing blaOXA-143-like and blaOXA-72 and Exhibiting Strong Biofilm Formation in a Mexican Hospital | 2ᵒ autor: Castillo-Ramirez, Santiago, Moreno-Manjon, Julia, Jolley, Keith A., Maiden M.C.J., et al. | 2023 | Microorganisms | WoS-id: 001076932900001
Scopus-id: 2-s2.0-85172778159
| 10 | 11 |
| 24 | Genomic epidemiology of Acinetobacter baumannii goes global | 1ᵉʳ autor y autor de correspondencia: Castillo-Ramírez S. | 2023 | Mbio | WoS-id: 001099943600001
Scopus-id: 2-s2.0-85182874927
| 25 | 28 |
| 25 | Pandrug-resistant Acinetobacter baumannii from different clones and regions in Mexico have a similar plasmid carrying the blaOXA-72 gene | Coautor: Castillo-Ramírez, S, Fernandez-Vázquez, JL, Hernández-González, IL, Jarillo-Quijada, MD, et al. | 2023 | FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY | WoS-id: 001134207300001
Scopus-id: 2-s2.0-85181206328
| 14 | 14 |
| 26 | The importance of Acinetobacter baumannii from non-human sources | 1ᵉʳ autor y autor de correspondencia: Castillo-Ramírez S. | 2023 | Lancet Microbe | WoS-id: 001164949500001
Scopus-id: 2-s2.0-85172797958
| 23 | 22 |
| 27 | The Acinetobacter baumannii website (Ab-web): a multidisciplinary knowledge hub, communication platform, and workspace | Coautor: Castillo-Ramírez S., Karah N., Mateo-Estrada V., Higgins P.G., et al. | 2023 | Fems Microbes | WoS-id: 001327605400001
Scopus-id: 2-s2.0-85177494395
| 6 | 5 |
| 28 | Emergence of ADC-5 Cephalosporinase in environmental Acinetobacter baumannii from a German tank milk with a novel Sequence Type | Coautor: Castillo-Ramírez S., Sykes E.M.E., Mateo-Estrada V., Zhanel G., et al. | 2023 | Access Microbiology | Scopus-id: 2-s2.0-85188888234
| 0 | 3 |
| 29 | The promiscuous and highly mobile resistome of Acinetobacter baumannii | Coautor y autor de correspondencia: Castillo-Ramirez, Santiago, Hernandez-Gonzalez, Ismael L., Mateo-Estrada, Valeria | 2022 | Microbial Genomics | WoS-id: 000752012700008
Scopus-id: 2-s2.0-85123816752
| 35 | 37 |
| 30 | Acinetobacter baumannii Sampled from Cattle and Pigs Represent Novel Clones | Coautor: Castillo-Ramirez, Santiago, Mateo-Estrada, Valeria, Vali, Leila, Hamouda, Ahmed, et al. | 2022 | Microbiology Spectrum | WoS-id: 000819227400001
Scopus-id: 2-s2.0-85137137953
| 29 | 31 |
| 31 | Beyond microbial core genomic epidemiology: towards pan genomic epidemiology | 1ᵉʳ autor y autor de correspondencia: Castillo-Ramírez S. | 2022 | Lancet Microbe | WoS-id: 000821505500003
Scopus-id: 2-s2.0-85127192545
| 13 | 13 |
| 32 | Mining of Thousands of Prokaryotic Genomes Reveals High Abundance of Prophages with a Strictly Narrow Host Range | Coautor: Castillo-Ramirez, Santiago, Lopez-Leal, Gamaliel, Carolina Camelo-Valera, Laura, Manuel Hurtado-Ramirez, Juan, et al. | 2022 | Msystems | WoS-id: 000832242700003
Scopus-id: 2-s2.0-85137130555
| 63 | 63 |
| 33 | Zoonotic Acinetobacter baumannii: the need for genomic epidemiology in a One Health context | 1ᵉʳ autor y autor de correspondencia: Castillo-Ramirez, Santiago | 2022 | Lancet Microbe | WoS-id: 000925118600005
Scopus-id: 2-s2.0-85142853513
| 31 | 33 |
| 34 | A novel vieuvirus from multidrug-resistant Acinetobacter baumannii | Coautor: Castillo-Ramirez, Santiago, Lopez-Leal, Gamaliel, Reyes-Munoz, Alejandro, Santamaria, Rosa Isela, et al. | 2021 | ARCHIVES OF VIROLOGY | WoS-id: 000622225200001
Scopus-id: 2-s2.0-85101736933
| 11 | 11 |
| 35 | Editorial: Genomic Basis of Antibiotic Resistance and Virulence in Acinetobacter | Coautor y autor de correspondencia: Castillo-Ramirez, Santiago, Evans, Benjamin A., Kumar, Ayush | 2021 | FRONTIERS IN MICROBIOLOGY | WoS-id: 000639412300001
Scopus-id: 2-s2.0-85104087033
| 9 | 10 |
| 36 | The Population Structure of Borrelia lusitaniae Is Reflected by a Population Division of Its Ixodes Vector | Coautor: Castillo-Ramirez, Santiago, Norte, Ana Claudia, Boyer, Pierre H., Chvostac, Michal, et al. | 2021 | Microorganisms | WoS-id: 000662375600001
Scopus-id: 2-s2.0-85104790960
| 27 | 30 |
| 37 | Reassessing the evolution of the 1-deoxy-D-xylulose 5-phosphate synthase family suggests a possible novel function for the DXS class 3 proteins | Coautor: Castillo-Ramirez, Santiago, de Luna-Valdez, Luis, Chenge-Espinosa, Marel, Hernandez-Munoz, Arihel, et al. | 2021 | PLANT SCIENCE | WoS-id: 000684980800002
Scopus-id: 2-s2.0-85108086027
| 17 | 19 |
| 38 | Accessory Genomic Epidemiology of Cocirculating Acinetobacter baumannii Clones | Coautor: Castillo-Ramirez, Santiago, Mateo-Estrada, Valeria, Fernández-Vázquez J.L., Moreno-Manjon, Julia, et al. | 2021 | Msystems | WoS-id: 000709832000014
Scopus-id: 2-s2.0-85111117907
| 29 | 28 |
| 39 | Non-clinical settings - the understudied facet of antimicrobial drug resistance | 1ᵉʳ autor: Castillo-Ramirez, Santiago, Ghaly, Timothy, Gillings, Michael | 2021 | ENVIRONMENTAL MICROBIOLOGY | WoS-id: 000718001400001
Scopus-id: 2-s2.0-85119132906
| 14 | 13 |
| 40 | High Phenotypic and Genotypic Diversity of Enterococcus faecium from Clinical and Commensal Isolates in Third Level Hospital | Coautor: Castillo-Ramirez, Santiago, Mayoral-Teran, Claudia, Flores-Moreno, Karen, Cevallos, Miguel A., et al. | 2020 | MICROBIAL DRUG RESISTANCE | WoS-id: 000487289800001
Scopus-id: 2-s2.0-85081646332
| 2 | 2 |
| 41 | Origin of OXA-23 Variant OXA-239 from a Recently Emerged Lineage of Acinetobacter baumannii International Clone V | Coautor: Castillo-Ramirez, Santiago, Graña-Miraglia L., Evans, Benjamin A., Lopez-Jacome, Luis E., et al. | 2020 | mSphere | WoS-id: 000510849900027
Scopus-id: 2-s2.0-85077689764
| 39 | 38 |
| 42 | Prophages Encode Antibiotic Resistance Genes in Acinetobacter baumannii | Coautor: Castillo-Ramirez, Santiago, Lopez-Leal, Gamaliel, Santamaria, Rosa Isela, Cevallos, Miguel Angel, et al. | 2020 | MICROBIAL DRUG RESISTANCE | WoS-id: 000517967000001
Scopus-id: 2-s2.0-85085708378
| 28 | 28 |
| 43 | Rejection of the name Borreliella and all proposed species comb. nov. placed therein | 2ᵒ autor: Castillo-Ramirez, Santiago, Margos, Gabriele, Cutler, Sally, Dessau, Ram B., et al. | 2020 | INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY | WoS-id: 000537392000080
Scopus-id: 2-s2.0-85085630592
| 22 | 27 |
| 44 | Chromosome Architecture and Gene Content of the Emergent Pathogen Acinetobacter haemolyticus | Coautor: Castillo-Ramirez, Santiago, Castro-Jaimes, Semiramis, Bello-Lopez, Elena, Velazquez-Acosta, Consuelo, et al. | 2020 | FRONTIERS IN MICROBIOLOGY | WoS-id: 000540562000001
Scopus-id: 2-s2.0-85086177209
| 9 | 11 |
| 45 | Structure and Evolution ofAcinetobacter baumanniiPlasmids | Coautor: Castillo-Ramirez, Santiago, Salgado-Camargo, Abraham D., Castro-Jaimes, Semiramis, Gutierrez-Rios, Rosa-Maria, et al. | 2020 | FRONTIERS IN MICROBIOLOGY | WoS-id: 000548629300001
Scopus-id: 2-s2.0-85087288214
| 77 | 77 |
| 46 | Characterization of Extremely Drug-Resistant and HypervirulentAcinetobacter baumanniiAB030 | Coautor: Castillo-Ramirez, Santiago, Singh, Manu, De Silva, P. Malaka, Al-Saadi, Yasser, et al. | 2020 | ANTIBIOTICS-BASEL | WoS-id: 000551677900001
Scopus-id: 2-s2.0-85086654384
| 15 | 17 |
| 47 | Phylogeographical analyses and antibiotic resistance genes of acinetobacter johnsonii highlight its clinical relevance | 1ᵉʳ autor: Castillo-Ramirez, Santiago, Mateo-Estrada, Valeria, Gonzalez-Rocha, Gerardo, Opazo-Capurro, Andres | 2020 | mSphere | WoS-id: 000571787800014
Scopus-id: 2-s2.0-85087472091
| 25 | 27 |
| 48 | High mortality in an outbreak of multidrug resistant Acinetobacter baumannii infection introduced to an oncological hospital by a patient transferred from a general hospital | Coautor: Castillo-Ramirez, Santiago, Cornejo-Juarez, Patricia, Cevallos M.A., Castro-Jaimes, Semiramis, et al. | 2020 | PLOS ONE | WoS-id: 000575913700010
Scopus-id: 2-s2.0-85088529108
| 40 | 44 |
| 49 | Spirochetes isolated from arthropods constitute a novel genus Entomospira genus novum within the order Spirochaetales | Coautor: Castillo-Ramirez, Santiago, Grana-Miraglia, Lucia, Sikutova, Silvie, Vancova, Marie, et al. | 2020 | SCIENTIFIC REPORTS | WoS-id: 000582686700003
Scopus-id: 2-s2.0-85092468734
| 9 | 9 |
| 50 | Origin and Evolutionary Dynamics of the miR2119 and ADH1 Regulatory Module in Legumes | Coautor: Castillo-Ramírez S., De la Rosa C., Lozano L., Covarrubias A.A., et al. | 2020 | GENOME BIOLOGY AND EVOLUTION | WoS-id: 000606568300012
Scopus-id: 2-s2.0-85097570912
| 9 | 10 |
| 51 | Antibiotic-resistant Acinetobacter baumannii is a One Health problem | 2ᵒ autor y autor de correspondencia: Castillo-Ramirez, Santiago, Hernandez-Gonzalez, Ismael L. | 2020 | Lancet Microbe | WoS-id: 000612985800006
Scopus-id: 2-s2.0-85103937781
| 46 | 49 |
| 52 | Inaccurate multilocus sequence typing of Acinetobacter baumannii | 1ᵉʳ autor: Castillo-Ramirez, Santiago, Grana-Miraglia, Lucia | 2019 | EMERGING INFECTIOUS DISEASES | WoS-id: 000453546600034
Scopus-id: 2-s2.0-85058757101
| 47 | 51 |
| 53 | Unexplored genetic diversity of multidrug- A nd extremely drug-resistant acinetobacter baumannii isolates from tertiary hospitals in Honduras | Coautor: Castillo-Ramírez S., López-Leal G., Zuniga-Moya J.C., Castro-Jaimes S., et al. | 2019 | MICROBIAL DRUG RESISTANCE | WoS-id: 000470692800009
Scopus-id: 2-s2.0-85066856689
| 14 | 14 |
| 54 | Phylogenomics Reveals Clear Cases of Misclassification and Genus-Wide Phylogenetic Markers for Acinetobacter | Coautor: Castillo-Ramirez, Santiago, Mateo-Estrada, Valeria, Graña-Miraglia L., Lopez-Leal, Gamaliel | 2019 | GENOME BIOLOGY AND EVOLUTION | WoS-id: 000491234700008
Scopus-id: 2-s2.0-85072133460
| 47 | 50 |
| 55 | Invasive methicillin-resistant Staphylococcus aureus USA500 strains from the U.S. Emerging Infections Program constitute three geographically distinct lineages | 2ᵒ autor: Castillo-Ramirez, S., Frisch, M. B., Petit, III, R. A., Farley, M. M., et al. | 2018 | mSphere | WoS-id: 000437234900047
Scopus-id: 2-s2.0-85048219574
| 30 | 31 |
| 56 | Phylogenomic classification and the evolution of Clonal complex 5 methicillin-resistant Staphylococcus aureus in the Western Hemisphere | Coautor: Castillo-Ramirez, Santiago, Challagundla, Lavanya, Reyes, Jinnethe, Rafiqullah, Iftekhar, et al. | 2018 | FRONTIERS IN MICROBIOLOGY | WoS-id: 000442365300002
Scopus-id: 2-s2.0-85052615715
| 78 | 79 |
| 57 | Phylogenomics picks out the par excellence markers for species phylogeny in the genus Staphylococcus | Coautor: Castillo-Ramirez, Santiago, Grana-Miraglia, Lucia, Arreguin-Perez, Cesar, Lopez-Lear, Gamaliel, et al. | 2018 | PEERJ | WoS-id: 000448174400007
Scopus-id: 2-s2.0-85055710327
| 19 | 19 |
| 58 | 1,2-Diacylglycerol choline phosphotransferase catalyzes the final step in the unique Treponema denticola phosphatidylcholine biosynthesis pathway | Coautor: Castillo-Ramirez, Santiago, Angel Vences-Guzman, Miguel, Goetting-Minesky, M. Paula, Guan, Ziqiang, et al. | 2017 | MOLECULAR MICROBIOLOGY | WoS-id: 000394703900010
Scopus-id: 2-s2.0-85013844830
| 5 | 6 |
| 59 | Rapid Gene Turnover as a Significant Source of Genetic Variation in a Recently Seeded Population of a Healthcare-Associated Pathogen | Coautor: Castillo-Ramirez, Santiago, Grana-Miraglia, Lucia, Lozano, Luis F., Velazquez, Consuelo, et al. | 2017 | FRONTIERS IN MICROBIOLOGY | WoS-id: 000411358600001
Scopus-id: 2-s2.0-85029765129
| 46 | 46 |
| 60 | Complete genome sequence of a blaOXA-58-producing Acinetobacter baumannii strain isolated from a Mexican hospital | Coautor: Castillo-Ramirez, Santiago, Perez-Oseguera, Angeles, Castro-Jaimes, Semiramis, Salgado-Camargo A.D., et al. | 2017 | Microbiology Resource Announcements | WoS-id: 000460732900019
Scopus-id: 2-s2.0-85029217087
| 3 | 5 |
| 61 | Trans-Atlantic exchanges have shaped the population structure of the Lyme disease agent Borrelia burgdorferi sensu stricto | 1ᵉʳ autor: Castillo-Ramirez, S., Fingerle, V., Jungnick, S., Straubinger, R. K., et al. | 2016 | SCIENTIFIC REPORTS | WoS-id: 000371603600001
Scopus-id: 2-s2.0-84960345018
| 23 | 24 |
| 62 | Species-specific diversity of novel bacterial lineages and differential abundance of predicted pathways for toxic compound degradation in scorpion gut microbiota | Coautor: Castillo-Ramirez, Santiago, Bolanos, Luis M., Rosenblueth, Monica, Figuier-Huttin, Gilles, et al. | 2016 | ENVIRONMENTAL MICROBIOLOGY | WoS-id: 000375481200008
Scopus-id: 2-s2.0-84939226193
| 21 | 23 |
| 63 | Whole-Genome Sequencing for Routine Pathogen Surveillance in Public Health: a Population Snapshot of Invasive Staphylococcus aureus in Europe | Coautor: Castillo-Ramirez, Santiago, Aanensen, David M., Feil, Edward J., Holden, Matthew T. G., et al. | 2016 | Mbio | WoS-id: 000383440300020
Scopus-id: 2-s2.0-84978959412
| 166 | 184 |
| 64 | Recurrent evolution of host and vector association in bacteria of the Borrelia burgdorferi sensu lato species complex | Coautor: Castillo-Ramirez, Santiago, Becker, Noemie S., Margos, Gabriele, Blum, Helmut, et al. | 2016 | Bmc Genomics | WoS-id: 000383472900003
Scopus-id: 2-s2.0-84987881547
| 40 | 45 |
| 65 | Dynamics of genome change among Legionella species | Coautor: Castillo-Ramirez, Santiago, Joseph, Sandeep J., Cox, Daniel, Wolff, Bernard, et al. | 2016 | SCIENTIFIC REPORTS | WoS-id: 000383643900001
Scopus-id: 2-s2.0-84987985183
| 23 | 26 |
| 66 | Evolution of a Sigma Factor: An All-In-One of Gene Duplication, Horizontal Gene Transfer, Purifying Selection, and Promoter Differentiation | Coautor y autor de correspondencia: Castillo-Ramírez S., López-Leal G., Cevallos M.A. | 2016 | FRONTIERS IN MICROBIOLOGY | WoS-id: 000443440800001
Scopus-id: 2-s2.0-84966262697
| 14 | 14 |
| 67 | Population structure of neisseria gonorrhoeae based on whole genome data and its relationship with antibiotic resistance | Coautor: Castillo-Ramirez S., Ezewudo M.N., Joseph S.J., Dean D., et al. | 2015 | PEERJ | WoS-id: 000350765400002
Scopus-id: 2-s2.0-84926433512
| 57 | 57 |
| 68 | Chlamydiaceae genomics reveals interspecies admixture and the recent evolution of Chlamydia abortus infecting lower mammalian species and humans | Coautor: Castillo-Ramirez S., Joseph S.J., Marti H., Didelot X., et al. | 2015 | GENOME BIOLOGY AND EVOLUTION | WoS-id: 000366498500003
Scopus-id: 2-s2.0-84956887775
| 32 | 36 |
| 69 | Microevolution of renibacterium salmoninarum: Evidence for intercontinental dissemination associated with fish movements | Coautor: Castillo-Ramirez S., Brynildsrud O., Feil E.J., Bohlin J., et al. | 2014 | ISME JOURNAL | WoS-id: 000333189700002
Scopus-id: 2-s2.0-84899462472
| 32 | 34 |
| 70 | RNA-Seq analysis of the multipartite genome of Rhizobium etli CE3 shows different replicon contributions under heat and saline shock | Coautor: Castillo-Ramírez S., López-Leal G., Tabche M.L., Mendoza-Vargas A., et al. | 2014 | Bmc Genomics | WoS-id: 000341597700001
Scopus-id: 2-s2.0-84907292963
| 28 | 29 |
| 71 | Genetic relationships of Vibrio parahaemolyticus isolates from clinical, human carrier, and environmental sources in Thailand, determined by multilocus sequence analysis | Coautor: Castillo-Ramírez S., Theethakaew C., Feil E.J., Aanensen D.M., et al. | 2013 | APPLIED AND ENVIRONMENTAL MICROBIOLOGY | WoS-id: 000316183500029
Scopus-id: 2-s2.0-84875547164
| 61 | 66 |
| 72 | A genomic portrait of the emergence, evolution, and global spread of a methicillin-resistant Staphylococcus aureus pandemic | Coautor: Castillo-Ramírez S., Holden M.T.G., Hsu L.-Y., Kurt K., et al. | 2013 | GENOME RESEARCH | WoS-id: 000316920500007
Scopus-id: 2-s2.0-84875741847
| 363 | 385 |
| 73 | Two boundaries separate borrelia burgdorferi populations in north america | Coautor: Castillo-Ramírez S., Margos G., Tsao J.I., Girard Y.A., et al. | 2012 | APPLIED AND ENVIRONMENTAL MICROBIOLOGY | WoS-id: 000307611800010
Scopus-id: 2-s2.0-84866182014
| 40 | 44 |
| 74 | Phylogeography of Lyme borreliosis-group spirochetes and methicillin-resistant Staphylococcus aureus | 2ᵒ autor: Castillo-Ramírez S., Margos G., Hoen A.G. | 2012 | Parasitology | WoS-id: 000311904900012
Scopus-id: 2-s2.0-84870544166
| 12 | 13 |
| 75 | Phylogeographic variation in recombination rates within a global clone of methicillin-resistant Staphylococcus aureus | 1ᵉʳ autor: Castillo-Ramírez S., Corander J., Marttinen P., Aldeljawi M., et al. | 2012 | GENOME BIOLOGY | WoS-id: 000315869800015
Scopus-id: 2-s2.0-84901416262
| 84 | 88 |
| 76 | Transcriptional profiling of fetal hypothalamic TRH neurons | Coautor: Castillo-Ramírez S., Guerra-Crespo M., Pérez-Monter C., Janga S.C., et al. | 2011 | Bmc Genomics | WoS-id: 000292249600001
Scopus-id: 2-s2.0-79955535158
| 7 | 8 |
| 77 | The impact of recombination on dN/dS within recently emerged bacterial clones | 1ᵉʳ autor: Castillo-Ramírez S., Harris S.R., Holden M.T.G., He M., et al. | 2011 | PLOS PATHOGENS | WoS-id: 000293339300022
Scopus-id: 2-s2.0-79960967240
| 72 | 75 |
| 78 | A very early-branching staphylococcus aureus lineage lacking the carotenoid pigment staphyloxanthin | Coautor: Castillo-Ramirez S., Holt D.C., Holden M.T.G., Tong S.Y.C., et al. | 2011 | GENOME BIOLOGY AND EVOLUTION | WoS-id: 000295693200041
Scopus-id: 2-s2.0-84855753946
| 147 | 157 |
| 79 | The Rhizobium etli RpoH1 and RpoH2 sigma factors are involved in different stress responses | Coautor: Castillo-Ramirez, S, Martinez-Salazar, JM, Sandoval-Calderon, M, Guo, XW, et al. | 2009 | MICROBIOLOGY-SGM | WoS-id: 000263428900007
Scopus-id: 2-s2.0-62249222127
| 53 | 52 |
| 80 | Horizontal gene transfer and diverse functional constrains within a common replication-partitioning system in Alphaproteobacteria: the repABC operon | 1ᵉʳ autor: Castillo-Ramirez, S, Vazquez-Castellanos, JF, Gonzalez, V, Cevallos, MA | 2009 | Bmc Genomics | WoS-id: 000272357900001
Scopus-id: 2-s2.0-71049177075
| 35 | 36 |
| 81 | Factors affecting the concordance between orthologous gene trees and species tree in bacteria | 1ᵉʳ autor: Castillo-Ramirez, S, Gonzalez, V | 2008 | BMC EVOLUTIONARY BIOLOGY | WoS-id: 000263053200001
Scopus-id: 2-s2.0-58149301586
| 19 | 19 |
| 82 | A Common Genomic Framework for a Diverse Assembly of Plasmids in the Symbiotic Nitrogen Fixing Bacteria | 2ᵒ autor: Castillo-Ramirez S., Crossman L.C., McAnnula C., Lozano L., et al. | 2008 | PLOS ONE | WoS-id: 000263288200032
Scopus-id: 2-s2.0-49749105565
| 59 | 57 |
| 83 | Rapid evolutionary change of common bean (Phaseolus vulgaris L) plastome, and the genomic diversification of legume chloroplasts | 2ᵒ autor: Castillo-Ramírez S., Guo X., González V., Bustos P., et al. | 2007 | Bmc Genomics | WoS-id: 000248702100001
Scopus-id: 2-s2.0-34547789868
| 98 | 90 |
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