| 1 | RegulonDB v12.0:ã comprehensive resource of transcriptional regulation in E. coli K-12 | 2ᵒ autor: Gama-Castro S., Salgado H., Lara P., Mejia-Almonte C., et al. | 2024 | NUCLEIC ACIDS RESEARCH | WoS-id: 001102810900001
Scopus-id: 2-s2.0-85181777832
| 6 | 7 |
| 2 | Flexible gold standards for transcription factor regulatory interactions in Escherichia coli K-12: architecture of evidence types | 2ᵒ autor: Gama-Castro S., Lara P., Salgado H., Rioualen C., et al. | 2024 | Frontiers in Genetics | WoS-id: 001186999100001
Scopus-id: 2-s2.0-85188101282
| 0 | 0 |
| 3 | The EcoCyc Database (2023) | Coautor: Gama-Castro S., Karp P.D., Paley S., Caspi R., et al. | 2023 | EcoSal Plus | Scopus-id: 2-s2.0-85176768413
| 0 | 14 |
| 4 | Sensory Systems and Transcriptional Regulation in Escherichia coli | 2ᵒ autor: Gama-Castro, Socorro, Femerling, Georgette, Lara, Paloma, Ledezma-Tejeida, Daniela, et al. | 2022 | Frontiers in Bioengineering and Biotechnology | WoS-id: 000761661300001
Scopus-id: 2-s2.0-85125402152
| 4 | 4 |
| 5 | RegulonDB 11.0: Comprehensive high-throughput datasets on transcriptional regulation in Escherichia coli K-12 | Coautor: Gama-Castro S., Tierrafría V.H., Rioualen C., Salgado H., et al. | 2022 | Microbial Genomics | WoS-id: 000812938700011
Scopus-id: 2-s2.0-85130765382
| 46 | 52 |
| 6 | The EcoCyc Database in 2021 | 2ᵒ autor: Gama-Castro, Socorro, Keseler, Ingrid M., Mackie, Amanda, Billington, Richard, et al. | 2021 | FRONTIERS IN MICROBIOLOGY | WoS-id: 000683854200001
Scopus-id: 2-s2.0-85112326830
| 125 | 132 |
| 7 | Lisen&Curate: A platform to facilitate gathering textual evidence for curation of regulation of transcription initiation in bacteria | Coautor: Gama-Castro S., Díaz-Rodríguez M., Lithgow-Serrano O., Guadarrama-García F., et al. | 2021 | BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS | WoS-id: 000703308500001
Scopus-id: 2-s2.0-85115326527
| 3 | 3 |
| 8 | Knowledge extraction for assisted curation o f summaries of bacterial transcription factor prorerties | Coautor: Gama-Castro, Socorro, Mendez-Cruz, Carlos-Francisco, Blanchet, Antonio, Godinez, Alan, et al. | 2020 | DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION | WoS-id: 000601278100001
Scopus-id: 2-s2.0-85098471761
| 2 | 2 |
| 9 | RegulonDB v 10.5: tackling challenges to unify classic and high throughput knowledge of gene regulation in E. coli K-12 | Coautor: Gama-Castro S., Santos-Zavaleta A., Salgado H., Sánchez-Pérez M., et al. | 2019 | NUCLEIC ACIDS RESEARCH | WoS-id: 000462587400034
Scopus-id: 2-s2.0-85059797142
| 236 | 243 |
| 10 | MCO: towards an ontology and unified vocabulary for a framework-based annotation of microbial growth conditions | Coautor: Gama-Castro, S., Tierrafria, V. H., Mejia-Almonte, C., Camacho-Zaragoza, J. M., et al. | 2019 | Bioinformatics | WoS-id: 000467227300017
Scopus-id: 2-s2.0-85062289226
| 3 | 3 |
| 11 | Similarity corpus on microbial transcriptional regulation | 2ᵒ autor: Gama-Castro S., Lithgow-Serrano O., Ishida-Gutiérrez C., Mejía-Almonte C., et al. | 2019 | JOURNAL OF BIOMEDICAL SEMANTICS | WoS-id: 000468929800001
Scopus-id: 2-s2.0-85066457982
| 8 | 9 |
| 12 | A unified resource for transcriptional regulation in Escherichia coli K-12 incorporating high-throughput-generated binding data into RegulonDB version 10.0 | Coautor: Gama-Castro S., Santos-Zavaleta A., Sánchez-Pérez M., Salgado H., et al. | 2018 | BMC BIOLOGY | WoS-id: 000441842200001
Scopus-id: 2-s2.0-85051701959
| 33 | 33 |
| 13 | The EcoCyc Database | Coautor: Gama-Castro S., Karp P.D., Ong W.K., Paley S., et al. | 2018 | EcoSal Plus | Scopus-id: 2-s2.0-85056491267
| 0 | 59 |
| 14 | The EcoCyc database: reflecting new knowledge about Escherichia coli K-12 | Coautor: Gama-Castro, Socorro, Keseler, Ingrid M., Mackie, Amanda, Santos-Zavaleta, Alberto, et al. | 2017 | NUCLEIC ACIDS RESEARCH | WoS-id: 000396575500076
Scopus-id: 2-s2.0-85015989839
| 383 | 396 |
| 15 | Strategies towards digital and semi-automated curation in RegulonDB | Coautor: Gama-Castro, S., Rinaldi, F., Lithgow, O., Solano, H., et al. | 2017 | DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION | WoS-id: 000397531600001
Scopus-id: 2-s2.0-85015961548
| 3 | 7 |
| 16 | First steps in automatic summarization of transcription factor properties for RegulonDB: classification of sentences about structural domains and regulated processes | 2ᵒ autor: Gama-Castro, Socorro, Mendez-Cruz, Carlos-Francisco, Mejia-Almonte, Citlalli, Castillo-Villalba, Marco-Polo, et al. | 2017 | DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION | WoS-id: 000412308000001
Scopus-id: 2-s2.0-85050188913
| 6 | 6 |
| 17 | Strategies towards digital and semi-automated curation in RegulonDB (vol 2017, bax012, 2017) | Coautor: Gama-Castro, Socorro, Rinaldi, Fabio, Lithgow, Oscar, Solano, Hilda, et al. | 2017 | DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION | WoS-id: 000427186500001
Scopus-id: 2-s2.0-85063712388
| 0 | 0 |
| 18 | RegulonDB version 9.0: high-level integration of gene regulation, coexpression, motif clustering and beyond | 1ᵉʳ autor: Gama-Castro, Socorro, Salgado, Heladia, Santos-Zavaleta, Alberto, Ledezma-Tejeida, Daniela, et al. | 2016 | NUCLEIC ACIDS RESEARCH | WoS-id: 000371261700018
Scopus-id: 2-s2.0-84976874666
| 341 | 358 |
| 19 | COLOMBOS v3.0: leveraging gene expression compendia for cross- species analyses | Coautor: Gama-Castro, Socorro, Moretto, Marco, Sonego, Paolo, Dierckxsens, Nicolas, et al. | 2016 | NUCLEIC ACIDS RESEARCH | WoS-id: 000371261700087
Scopus-id: 2-s2.0-84976905759
| 49 | 48 |
| 20 | Overview of the interactive task in BioCreative V | Coautor: Gama-Castro, Socorro, Wang, Qinghua, Abdul, Shabbir S., Almeida, Lara, et al. | 2016 | DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION | WoS-id: 000383834100001
Scopus-id: 2-s2.0-85009926974
| 25 | 28 |
| 21 | COLOMBOS v2.0: An ever expanding collection of bacterial expression compendia | Coautor: Gama-Castro S., Meysman P., Sonego P., Bianco L., et al. | 2014 | NUCLEIC ACIDS RESEARCH | WoS-id: 000331139800095
Scopus-id: 2-s2.0-84891750356
| 30 | 30 |
| 22 | Assisted curation of regulatory interactions and growth conditions of OxyR in E. Colik-12 | 1ᵉʳ autor: Gama-Castro S., Rinaldi F., López-Fuentes A., Balderas-Martínez Y.I., et al. | 2014 | DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION | WoS-id: 000338567900001
Scopus-id: 2-s2.0-84987638658
| 10 | 11 |
| 23 | The EcoCyc database | Coautor: Gama-Castro S., Karp P.D., Weaver D., Paley S., et al. | 2014 | EcoSal Plus | Scopus-id: 2-s2.0-84932633215
| 0 | 55 |
| 24 | RegulonDB v8.0: Omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more | Coautor: Gama-Castro, S, Salgado, H, Peralta-Gil, M, Santos-Zavaleta, A, et al. | 2013 | NUCLEIC ACIDS RESEARCH | WoS-id: 000312893300028
Scopus-id: 2-s2.0-84876543942
| 326 | 341 |
| 25 | EcoCyc: fusing model organism databases with systems biology | Coautor: Gama-Castro S., Keseler I.M., Mackie A., Peralta-Gil M., et al. | 2013 | NUCLEIC ACIDS RESEARCH | WoS-id: 000312893300086
Scopus-id: 2-s2.0-84876556918
| 428 | 439 |
| 26 | RegulonDB version 7.0: Transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units) | 1ᵉʳ autor: Gama-Castro S., Salgado H., Peralta-Gil M., Santos-Zavaleta A., et al. | 2011 | NUCLEIC ACIDS RESEARCH | WoS-id: 000285831700018
Scopus-id: 2-s2.0-78651299341
| 274 | 295 |
| 27 | EcoCyc: a comprehensive database of Escherichia coli biology | Coautor: Gama-Castro S., Keseler I.M., Collado-Vides J., Santos-Zavaleta A., et al. | 2011 | NUCLEIC ACIDS RESEARCH | WoS-id: 000285831700092
Scopus-id: 2-s2.0-78651281217
| 332 | 378 |
| 28 | A comparative genome analysis of the RpoS sigmulon shows a high diversity of responses and origins | 2ᵒ autor: Gama-Castro, S, Santos-Zavaleta, A, Perez-Rueda, E | 2011 | MICROBIOLOGY-SGM | WoS-id: 000291179900015
Scopus-id: 2-s2.0-79955767137
| 8 | 9 |
| 29 | Bioinformatics Resources for the Study of Gene Regulation in Bacteria | Coautor: Gama-Castro, S, Collado-Vides, J, Salgado, H, Morett, E, et al. | 2009 | JOURNAL OF BACTERIOLOGY | WoS-id: 000261628100002
Scopus-id: 2-s2.0-58149495994
| 20 | 21 |
| 30 | EcoCyc: A comprehensive view of Escherichia coli biology | Coautor: Gama-Castro S., Keseler I.M., Bonavides-Martínez C., Collado-Vides J., et al. | 2009 | NUCLEIC ACIDS RESEARCH | WoS-id: 000261906200084
Scopus-id: 2-s2.0-58149179979
| 277 | 302 |
| 31 | RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation | 1ᵉʳ autor: Gama-Castro, S, Jimenez-Jacinto, V, Peralta-Gil, M, Santos-Zavaleta, A, et al. | 2008 | NUCLEIC ACIDS RESEARCH | WoS-id: 000252545400022
Scopus-id: 2-s2.0-38549140094
| 374 | 402 |
| 32 | Multidimensional annotation of the Escherichia coli K-12 genome | Coautor: Gama-Castro S., Karp P.D., Keseler I.M., Shearer A., et al. | 2007 | NUCLEIC ACIDS RESEARCH | WoS-id: 000252125900021
Scopus-id: 2-s2.0-38049007503
| 134 | 149 |
| 33 | The comprehensive updated regulatory network of Escherichia coli K-12 | Coautor: Gama-Castro S., Salgado H., Santos-Zavaleta A., Peralta-Gil M., et al. | 2006 | Bmc Bioinformatics | WoS-id: 000235550300001
Scopus-id: 2-s2.0-30644465547
| 50 | 48 |
| 34 | RegulonDB (version 5.0): Escherichia coli K-12 transcriptional regulatory network, operon organization, and growth conditions. | 2ᵒ autor: Gama-Castro S., Salgado H., Peralta-Gil M., Díaz-Peredo E., et al. | 2006 | NUCLEIC ACIDS RESEARCH | WoS-id: 000239307700086
Scopus-id: 2-s2.0-33644873438
| 269 | 299 |
| 35 | EcoCyc: A comprehensive database resource for Escherichia coli | Coautor: Gama-Castro S., Keseler I.M., Collado-Vides J., Ingraham J., et al. | 2005 | NUCLEIC ACIDS RESEARCH | WoS-id: 000226524300069
Scopus-id: 2-s2.0-13444262374
| 516 | 579 |
| 36 | RegulonDB (version 4.0): Transcriptional regulation, operon organization and growth conditions in Escherichia coli K-12 | 2ᵒ autor: Gama-Castro S., Salgado H., Martínez-Antonio A., Díaz-Peredo E., et al. | 2004 | NUCLEIC ACIDS RESEARCH | WoS-id: 000188079000071
Scopus-id: 2-s2.0-9144270496
| 192 | 226 |
| 37 | Environmental Conditions and Transcriptional Regulation in Escherichia coli: A Physiological Integrative Approach | Coautor: Gama-Castro S., Martínez-Antonio A., Salgado H., Gutiérrez-Ríos R.M., et al. | 2003 | BIOTECHNOLOGY AND BIOENGINEERING | WoS-id: 000187634500003
Scopus-id: 2-s2.0-0348062847
| 15 | 15 |
| 38 | The EcoCyc database | Coautor: Gama-Castro S., Karp P.D., Riley M., Saier M., et al. | 2002 | NUCLEIC ACIDS RESEARCH | WoS-id: 000173077100013
Scopus-id: 2-s2.0-0036084127
| 307 | 348 |
| 39 | RegulonDB (version 3.2): Transcriptional regulation and operon organization in Escherichia coli K-12 | Coautor: Gama-Castro S., Salgado H., Santos-Zavaleta A., Millán-Zárate D., et al. | 2001 | NUCLEIC ACIDS RESEARCH | WoS-id: 000166360300017
Scopus-id: 2-s2.0-0035162782
| 180 | 190 |
| 40 | Azotobacter vinelandii aldehyde dehydrogenase regulated by s54: Role in alcohol catabolism and encystment | 1ᵉʳ autor: Gama-Castro S., Núñez C., Segura D., Moreno S., et al. | 2001 | JOURNAL OF BACTERIOLOGY | WoS-id: 000171577200003
Scopus-id: 2-s2.0-0035688256
| 5 | 6 |
| 41 | RegulonDB (version 3.0): Transcriptional regulation and operon organization in Escherichia coli K-12 | Coautor: Gama-Castro S., Salgado H., Santos-Zavaleta A., Millán-Zárate D., et al. | 2000 | NUCLEIC ACIDS RESEARCH | WoS-id: 000084896300016
Scopus-id: 2-s2.0-0033971476
| 50 | 49 |
| 42 | Cloning and expression of the Entamoeba histolytica ERD2 gene | 2ᵒ autor: Gama-Castro S., Sanchez-Lopez R., Ramos M.A., Merino E., et al. | 1998 | MOLECULAR AND BIOCHEMICAL PARASITOLOGY | WoS-id: 000074044800015
Scopus-id: 2-s2.0-0032078829
| 20 | 19 |
| 43 | The secretory pathway of Entamoeba histolytica: Characterization and expression of the ERD2 gene | 2ᵒ autor: Gama Castro S., Sanchez-Lopez R., Lizardi P.M., Alagon A. | 1997 | Archives Of Medical Research | WoS-id: A1997WN84300002
Scopus-id: 2-s2.0-0031024067
| 9 | 2 |
ID's SCOPUS